Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ercc3P49135 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.85■□□□□ 0.29
Ercc3P49135 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Gm7063-201ENSMUST00000186840 981 ntBASIC16.85■□□□□ 0.29
Ercc3P49135 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.85■□□□□ 0.29
Ercc3P49135 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Mir125a-201ENSMUST00000083545 68 ntBASIC16.85■□□□□ 0.29
Ercc3P49135 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ercc3P49135 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.85■□□□□ 0.29
Ercc3P49135 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ercc3P49135 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Ercc3P49135 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc3P49135 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.84■□□□□ 0.29
Ercc3P49135 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ercc3P49135 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.84■□□□□ 0.29
Ercc3P49135 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.84■□□□□ 0.29
Ercc3P49135 Gm16476-201ENSMUST00000221544 139 ntBASIC16.84■□□□□ 0.29
Ercc3P49135 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.84■□□□□ 0.29
Ercc3P49135 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.84■□□□□ 0.29
Ercc3P49135 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ercc3P49135 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ercc3P49135 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ercc3P49135 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ercc3P49135 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc3P49135 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ercc3P49135 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ercc3P49135 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ercc3P49135 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Ercc3P49135 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ercc3P49135 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc3P49135 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Ercc3P49135 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc3P49135 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ercc3P49135 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc3P49135 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc3P49135 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.83■□□□□ 0.28
Ercc3P49135 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.83■□□□□ 0.28
Ercc3P49135 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.83■□□□□ 0.28
Ercc3P49135 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ercc3P49135 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc3P49135 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.83■□□□□ 0.28
Ercc3P49135 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.83■□□□□ 0.28
Ercc3P49135 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc3P49135 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc3P49135 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc3P49135 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ercc3P49135 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc3P49135 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Ercc3P49135 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc3P49135 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc3P49135 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ercc3P49135 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ercc3P49135 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 BC001981-202ENSMUST00000191393 1545 ntBASIC16.82■□□□□ 0.28
Ercc3P49135 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Ercc3P49135 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Ercc3P49135 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.82■□□□□ 0.28
Ercc3P49135 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.82■□□□□ 0.28
Ercc3P49135 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.82■□□□□ 0.28
Ercc3P49135 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms