Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
GdnfP48540 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
GdnfP48540 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
GdnfP48540 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
GdnfP48540 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.44□□□□□ -0.42
GdnfP48540 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
GdnfP48540 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.44□□□□□ -0.42
GdnfP48540 Gm27525-201ENSMUST00000184465 107 ntBASIC12.44□□□□□ -0.42
GdnfP48540 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
GdnfP48540 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
GdnfP48540 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
GdnfP48540 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GdnfP48540 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
GdnfP48540 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
GdnfP48540 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
GdnfP48540 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.43□□□□□ -0.42
GdnfP48540 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.43□□□□□ -0.42
GdnfP48540 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.43□□□□□ -0.42
GdnfP48540 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GdnfP48540 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.43□□□□□ -0.42
GdnfP48540 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GdnfP48540 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
GdnfP48540 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.43□□□□□ -0.42
GdnfP48540 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.43□□□□□ -0.42
GdnfP48540 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
GdnfP48540 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.43□□□□□ -0.42
GdnfP48540 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
GdnfP48540 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
GdnfP48540 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
GdnfP48540 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
GdnfP48540 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
GdnfP48540 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
GdnfP48540 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
GdnfP48540 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
GdnfP48540 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
GdnfP48540 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
GdnfP48540 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms