Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.32□□□□□ -0.28
Sox2P48432 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sox2P48432 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox2P48432 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sox2P48432 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.31□□□□□ -0.28
Sox2P48432 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox2P48432 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.31□□□□□ -0.28
Sox2P48432 Gm9182-201ENSMUST00000217829 639 ntBASIC13.31□□□□□ -0.28
Sox2P48432 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.31□□□□□ -0.28
Sox2P48432 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sox2P48432 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Sox2P48432 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Sox2P48432 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox2P48432 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox2P48432 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox2P48432 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox2P48432 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox2P48432 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.3□□□□□ -0.28
Sox2P48432 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Sox2P48432 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
Sox2P48432 Gm37230-201ENSMUST00000194491 818 ntBASIC13.3□□□□□ -0.28
Sox2P48432 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.3□□□□□ -0.28
Sox2P48432 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Sox2P48432 AV026068-213ENSMUST00000223675 1171 ntBASIC13.3□□□□□ -0.28
Sox2P48432 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.3□□□□□ -0.28
Sox2P48432 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
Sox2P48432 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox2P48432 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Sox2P48432 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sox2P48432 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sox2P48432 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sox2P48432 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox2P48432 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox2P48432 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 Gm27300-201ENSMUST00000184085 97 ntBASIC13.29□□□□□ -0.28
Sox2P48432 Gm27335-201ENSMUST00000184758 97 ntBASIC13.29□□□□□ -0.28
Sox2P48432 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.29□□□□□ -0.28
Sox2P48432 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.29□□□□□ -0.28
Sox2P48432 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
Sox2P48432 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox2P48432 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.29□□□□□ -0.28
Sox2P48432 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sox2P48432 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox2P48432 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.28□□□□□ -0.28
Sox2P48432 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Sox2P48432 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms