Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.5□□□□□ -0.09
Cxcl12P40224 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Proscos-202ENSMUST00000178990 666 ntBASIC14.5□□□□□ -0.09
Cxcl12P40224 Gm38341-201ENSMUST00000195357 515 ntBASIC14.5□□□□□ -0.09
Cxcl12P40224 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.5□□□□□ -0.09
Cxcl12P40224 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.5□□□□□ -0.09
Cxcl12P40224 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.5□□□□□ -0.09
Cxcl12P40224 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cxcl12P40224 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.5□□□□□ -0.09
Cxcl12P40224 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cxcl12P40224 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cxcl12P40224 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.49□□□□□ -0.09
Cxcl12P40224 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cxcl12P40224 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.49□□□□□ -0.09
Cxcl12P40224 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cxcl12P40224 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Cxcl12P40224 Gm10156-201ENSMUST00000122364 462 ntBASIC14.49□□□□□ -0.09
Cxcl12P40224 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.49□□□□□ -0.09
Cxcl12P40224 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cxcl12P40224 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.49□□□□□ -0.09
Cxcl12P40224 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.49□□□□□ -0.09
Cxcl12P40224 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Mir433-201ENSMUST00000093564 124 ntBASIC14.49□□□□□ -0.09
Cxcl12P40224 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cxcl12P40224 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cxcl12P40224 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cxcl12P40224 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cxcl12P40224 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
Cxcl12P40224 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cxcl12P40224 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.48□□□□□ -0.09
Cxcl12P40224 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.48□□□□□ -0.09
Cxcl12P40224 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.48□□□□□ -0.09
Cxcl12P40224 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.48□□□□□ -0.09
Cxcl12P40224 Gm27682-201ENSMUST00000183930 110 ntBASIC14.48□□□□□ -0.09
Cxcl12P40224 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Cxcl12P40224 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Cxcl12P40224 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cxcl12P40224 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.48□□□□□ -0.09
Cxcl12P40224 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cxcl12P40224 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cxcl12P40224 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cxcl12P40224 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcl12P40224 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms