Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC20.92■□□□□ 0.94
Chd1P40201 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1P40201 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1P40201 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1P40201 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1P40201 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC20.92■□□□□ 0.94
Chd1P40201 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1P40201 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1P40201 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1P40201 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1P40201 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.92■□□□□ 0.94
Chd1P40201 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Chd1P40201 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC20.92■□□□□ 0.94
Chd1P40201 Gm37835-201ENSMUST00000193305 361 ntBASIC20.92■□□□□ 0.94
Chd1P40201 Gm37042-201ENSMUST00000193816 581 ntBASIC20.92■□□□□ 0.94
Chd1P40201 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1P40201 Gm8385-201ENSMUST00000058999 643 ntBASIC20.92■□□□□ 0.94
Chd1P40201 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1P40201 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1P40201 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chd1P40201 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Chd1P40201 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1P40201 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1P40201 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1P40201 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Chd1P40201 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1P40201 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1P40201 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1P40201 Gm28450-201ENSMUST00000187349 638 ntBASIC20.91■□□□□ 0.94
Chd1P40201 Gm8885-201ENSMUST00000189382 598 ntBASIC20.91■□□□□ 0.94
Chd1P40201 Gm44126-201ENSMUST00000204831 514 ntBASIC20.91■□□□□ 0.94
Chd1P40201 Gm44069-201ENSMUST00000204898 506 ntBASIC20.91■□□□□ 0.94
Chd1P40201 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1P40201 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1P40201 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chd1P40201 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC20.9■□□□□ 0.94
Chd1P40201 Gm38049-201ENSMUST00000195698 1372 ntBASIC20.9■□□□□ 0.94
Chd1P40201 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Gm8285-201ENSMUST00000208293 759 ntBASIC20.9■□□□□ 0.94
Chd1P40201 Gm18393-201ENSMUST00000208349 1131 ntBASIC20.9■□□□□ 0.94
Chd1P40201 AC131330.1-201ENSMUST00000227814 1015 ntBASIC20.9■□□□□ 0.94
Chd1P40201 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Chd1P40201 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Chd1P40201 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC20.9■□□□□ 0.94
Chd1P40201 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.9■□□□□ 0.94
Chd1P40201 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Snord83b-201ENSMUST00000104546 94 ntBASIC20.9■□□□□ 0.94
Chd1P40201 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC20.9■□□□□ 0.94
Chd1P40201 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Gm26185-201ENSMUST00000157692 266 ntBASIC20.9■□□□□ 0.94
Chd1P40201 Gm44100-201ENSMUST00000204329 436 ntBASIC20.9■□□□□ 0.94
Chd1P40201 Gm19163-201ENSMUST00000223313 780 ntBASIC20.9■□□□□ 0.94
Chd1P40201 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chd1P40201 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chd1P40201 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chd1P40201 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chd1P40201 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd1P40201 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd1P40201 Gm5051-201ENSMUST00000204085 485 ntBASIC20.89■□□□□ 0.93
Chd1P40201 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chd1P40201 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC20.89■□□□□ 0.93
Chd1P40201 Gm32025-201ENSMUST00000217960 307 ntBASIC20.89■□□□□ 0.93
Chd1P40201 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd1P40201 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chd1P40201 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chd1P40201 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Chd1P40201 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1P40201 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC20.88■□□□□ 0.93
Chd1P40201 Gm12616-201ENSMUST00000118594 382 ntBASIC20.88■□□□□ 0.93
Chd1P40201 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1P40201 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC20.88■□□□□ 0.93
Chd1P40201 Gm12624-201ENSMUST00000177615 382 ntBASIC20.88■□□□□ 0.93
Chd1P40201 Gm12621-201ENSMUST00000177760 382 ntBASIC20.88■□□□□ 0.93
Chd1P40201 Gm12615-201ENSMUST00000177970 382 ntBASIC20.88■□□□□ 0.93
Chd1P40201 Gm12622-201ENSMUST00000177975 382 ntBASIC20.88■□□□□ 0.93
Chd1P40201 Gm12627-201ENSMUST00000178412 382 ntBASIC20.88■□□□□ 0.93
Chd1P40201 Gm12625-201ENSMUST00000179122 382 ntBASIC20.88■□□□□ 0.93
Chd1P40201 Gm12614-201ENSMUST00000179586 382 ntBASIC20.88■□□□□ 0.93
Chd1P40201 Gm12613-201ENSMUST00000180323 382 ntBASIC20.88■□□□□ 0.93
Chd1P40201 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC20.88■□□□□ 0.93
Chd1P40201 Gm9004-201ENSMUST00000218739 1222 ntBASIC20.88■□□□□ 0.93
Chd1P40201 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1P40201 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1P40201 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1P40201 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1P40201 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.88■□□□□ 0.93
Chd1P40201 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chd1P40201 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms