Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fen1P39749 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fen1P39749 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Fen1P39749 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Fen1P39749 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Fen1P39749 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.29□□□□□ -0.12
Fen1P39749 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.29□□□□□ -0.12
Fen1P39749 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Fen1P39749 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.29□□□□□ -0.12
Fen1P39749 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Fen1P39749 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.29□□□□□ -0.12
Fen1P39749 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
Fen1P39749 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Fen1P39749 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Fen1P39749 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.28□□□□□ -0.12
Fen1P39749 Gm8749-201ENSMUST00000117737 331 ntBASIC14.28□□□□□ -0.12
Fen1P39749 Gm7862-201ENSMUST00000121461 292 ntBASIC14.28□□□□□ -0.12
Fen1P39749 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.28□□□□□ -0.12
Fen1P39749 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.28□□□□□ -0.12
Fen1P39749 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Fen1P39749 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.28□□□□□ -0.12
Fen1P39749 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fen1P39749 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.27□□□□□ -0.12
Fen1P39749 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fen1P39749 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Fen1P39749 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fen1P39749 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Fen1P39749 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fen1P39749 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Fen1P39749 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fen1P39749 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fen1P39749 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Gm4899-201ENSMUST00000178708 719 ntBASIC14.27□□□□□ -0.13
Fen1P39749 Gm6550-201ENSMUST00000187574 993 ntBASIC14.27□□□□□ -0.13
Fen1P39749 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.27□□□□□ -0.13
Fen1P39749 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Fen1P39749 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Fen1P39749 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.27□□□□□ -0.13
Fen1P39749 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fen1P39749 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Fen1P39749 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fen1P39749 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms