Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdh4P39038 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdh4P39038 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.6□□□□□ -0.23
Cdh4P39038 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdh4P39038 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh4P39038 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Cdh4P39038 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.59□□□□□ -0.23
Cdh4P39038 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdh4P39038 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cdh4P39038 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdh4P39038 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Gm12882-201ENSMUST00000121696 517 ntBASIC13.59□□□□□ -0.23
Cdh4P39038 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdh4P39038 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Gm27533-201ENSMUST00000183800 152 ntBASIC13.59□□□□□ -0.23
Cdh4P39038 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.59□□□□□ -0.23
Cdh4P39038 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdh4P39038 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdh4P39038 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdh4P39038 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh4P39038 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh4P39038 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Cdh4P39038 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.58□□□□□ -0.23
Cdh4P39038 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh4P39038 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.58□□□□□ -0.23
Cdh4P39038 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh4P39038 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdh4P39038 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdh4P39038 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdh4P39038 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdh4P39038 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.58□□□□□ -0.24
Cdh4P39038 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdh4P39038 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdh4P39038 Gm16476-201ENSMUST00000221544 139 ntBASIC13.58□□□□□ -0.24
Cdh4P39038 Gm6888-201ENSMUST00000221983 706 ntBASIC13.58□□□□□ -0.24
Cdh4P39038 Dupd1-202ENSMUST00000224735 548 ntBASIC13.58□□□□□ -0.24
Cdh4P39038 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.58□□□□□ -0.24
Cdh4P39038 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.58□□□□□ -0.24
Cdh4P39038 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cdh4P39038 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdh4P39038 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdh4P39038 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdh4P39038 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Cdh4P39038 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.58□□□□□ -0.24
Cdh4P39038 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh4P39038 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cdh4P39038 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh4P39038 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh4P39038 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh4P39038 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh4P39038 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh4P39038 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh4P39038 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh4P39038 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cdh4P39038 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cdh4P39038 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh4P39038 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh4P39038 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh4P39038 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh4P39038 Gm13453-201ENSMUST00000118708 357 ntBASIC13.57□□□□□ -0.24
Cdh4P39038 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.57□□□□□ -0.24
Cdh4P39038 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.57□□□□□ -0.24
Cdh4P39038 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh4P39038 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 231.7 ms