Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Mir6956-201ENSMUST00000183598 62 ntBASIC13.13□□□□□ -0.31
Foxa1P35582 Gm27533-201ENSMUST00000183800 152 ntBASIC13.13□□□□□ -0.31
Foxa1P35582 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Gm16476-201ENSMUST00000221544 139 ntBASIC13.13□□□□□ -0.31
Foxa1P35582 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Foxa1P35582 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.13□□□□□ -0.31
Foxa1P35582 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Foxa1P35582 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Foxa1P35582 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Foxa1P35582 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Foxa1P35582 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Foxa1P35582 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.13□□□□□ -0.31
Foxa1P35582 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Foxa1P35582 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Foxa1P35582 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Foxa1P35582 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Foxa1P35582 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Foxa1P35582 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Foxa1P35582 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Foxa1P35582 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Foxa1P35582 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Gm25144-201ENSMUST00000179561 110 ntBASIC13.12□□□□□ -0.31
Foxa1P35582 Gm25352-201ENSMUST00000179815 110 ntBASIC13.12□□□□□ -0.31
Foxa1P35582 Shd-206ENSMUST00000225145 998 ntBASIC13.12□□□□□ -0.31
Foxa1P35582 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.12□□□□□ -0.31
Foxa1P35582 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Foxa1P35582 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Foxa1P35582 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.12□□□□□ -0.31
Foxa1P35582 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.12□□□□□ -0.31
Foxa1P35582 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Foxa1P35582 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Foxa1P35582 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.11□□□□□ -0.31
Foxa1P35582 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Foxa1P35582 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.11□□□□□ -0.31
Foxa1P35582 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.11□□□□□ -0.31
Foxa1P35582 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Foxa1P35582 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.11□□□□□ -0.31
Foxa1P35582 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.11□□□□□ -0.31
Foxa1P35582 Gm17837-201ENSMUST00000186435 985 ntBASIC13.11□□□□□ -0.31
Foxa1P35582 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Foxa1P35582 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Foxa1P35582 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Foxa1P35582 Gm6888-201ENSMUST00000221983 706 ntBASIC13.11□□□□□ -0.31
Foxa1P35582 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.11□□□□□ -0.31
Foxa1P35582 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms