Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 Gm8749-201ENSMUST00000117737 331 ntBASIC11.55□□□□□ -0.56
Rab5cP35278 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.55□□□□□ -0.56
Rab5cP35278 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.55□□□□□ -0.56
Rab5cP35278 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.55□□□□□ -0.56
Rab5cP35278 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.55□□□□□ -0.56
Rab5cP35278 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.55□□□□□ -0.56
Rab5cP35278 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.55□□□□□ -0.56
Rab5cP35278 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.55□□□□□ -0.56
Rab5cP35278 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.55□□□□□ -0.56
Rab5cP35278 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.55□□□□□ -0.56
Rab5cP35278 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rab5cP35278 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Rab5cP35278 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rab5cP35278 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Rab5cP35278 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Rab5cP35278 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.54□□□□□ -0.56
Rab5cP35278 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.54□□□□□ -0.56
Rab5cP35278 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rab5cP35278 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.54□□□□□ -0.56
Rab5cP35278 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Rab5cP35278 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.54□□□□□ -0.56
Rab5cP35278 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Gm45058-201ENSMUST00000205810 766 ntBASIC11.54□□□□□ -0.56
Rab5cP35278 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.54□□□□□ -0.56
Rab5cP35278 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.54□□□□□ -0.56
Rab5cP35278 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Rab5cP35278 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.54□□□□□ -0.56
Rab5cP35278 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rab5cP35278 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rab5cP35278 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rab5cP35278 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Rab5cP35278 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.53□□□□□ -0.56
Rab5cP35278 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Rab5cP35278 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Pck2-205ENSMUST00000226352 2784 ntBASIC11.53□□□□□ -0.56
Rab5cP35278 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rab5cP35278 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.53□□□□□ -0.56
Rab5cP35278 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rab5cP35278 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Mir770-201ENSMUST00000103252 94 ntBASIC11.53□□□□□ -0.56
Rab5cP35278 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.53□□□□□ -0.56
Rab5cP35278 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Rab5cP35278 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.53□□□□□ -0.56
Rab5cP35278 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rab5cP35278 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms