Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc5P32043 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc5P32043 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc5P32043 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc5P32043 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc5P32043 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc5P32043 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc5P32043 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc5P32043 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc5P32043 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc5P32043 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hoxc5P32043 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hoxc5P32043 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hoxc5P32043 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Hoxc5P32043 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc5P32043 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.17□□□□□ -0.3
Hoxc5P32043 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc5P32043 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
Hoxc5P32043 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc5P32043 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.17□□□□□ -0.3
Hoxc5P32043 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.17□□□□□ -0.3
Hoxc5P32043 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc5P32043 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc5P32043 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Hoxc5P32043 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.17□□□□□ -0.3
Hoxc5P32043 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxc5P32043 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hoxc5P32043 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxc5P32043 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc5P32043 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.16□□□□□ -0.3
Hoxc5P32043 Gm15467-201ENSMUST00000120582 445 ntBASIC13.16□□□□□ -0.3
Hoxc5P32043 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxc5P32043 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hoxc5P32043 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc5P32043 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc5P32043 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc5P32043 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc5P32043 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc5P32043 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc5P32043 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc5P32043 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc5P32043 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc5P32043 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc5P32043 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.15□□□□□ -0.3
Hoxc5P32043 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.15□□□□□ -0.3
Hoxc5P32043 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms