Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp3P28862 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp3P28862 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Mmp3P28862 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Mmp3P28862 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp3P28862 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp3P28862 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Mmp3P28862 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Mmp3P28862 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp3P28862 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.13■□□□□ 0.01
Mmp3P28862 Gm14127-201ENSMUST00000117906 678 ntBASIC15.13■□□□□ 0.01
Mmp3P28862 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.13■□□□□ 0.01
Mmp3P28862 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp3P28862 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.13■□□□□ 0.01
Mmp3P28862 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.13■□□□□ 0.01
Mmp3P28862 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp3P28862 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp3P28862 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp3P28862 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp3P28862 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.13■□□□□ 0.01
Mmp3P28862 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Mmp3P28862 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp3P28862 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp3P28862 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Mmp3P28862 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp3P28862 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Mmp3P28862 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.12■□□□□ 0.01
Mmp3P28862 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Mmp3P28862 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.12■□□□□ 0.01
Mmp3P28862 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Mmp3P28862 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.12■□□□□ 0.01
Mmp3P28862 Gm27701-201ENSMUST00000184498 110 ntBASIC15.12■□□□□ 0.01
Mmp3P28862 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.12■□□□□ 0.01
Mmp3P28862 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.12■□□□□ 0.01
Mmp3P28862 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.12■□□□□ 0.01
Mmp3P28862 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Mmp3P28862 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.12■□□□□ 0.01
Mmp3P28862 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Mmp3P28862 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Mmp3P28862 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Mmp3P28862 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.11■□□□□ 0.01
Mmp3P28862 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.11■□□□□ 0.01
Mmp3P28862 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.11■□□□□ 0.01
Mmp3P28862 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.11■□□□□ 0.01
Mmp3P28862 Gm8927-201ENSMUST00000181978 981 ntBASIC15.11■□□□□ 0.01
Mmp3P28862 Gm28911-201ENSMUST00000188837 117 ntBASIC15.11■□□□□ 0.01
Mmp3P28862 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.11■□□□□ 0.01
Mmp3P28862 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.11■□□□□ 0.01
Mmp3P28862 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.11■□□□□ 0.01
Mmp3P28862 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.11■□□□□ 0.01
Mmp3P28862 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.11■□□□□ 0.01
Mmp3P28862 Gm3222-201ENSMUST00000071282 990 ntBASIC15.11■□□□□ 0.01
Mmp3P28862 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Mmp3P28862 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.11■□□□□ 0.01
Mmp3P28862 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Mmp3P28862 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Mmp3P28862 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms