Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RxrbP28704 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RxrbP28704 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.26□□□□□ -0.13
RxrbP28704 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RxrbP28704 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RxrbP28704 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.25□□□□□ -0.13
RxrbP28704 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RxrbP28704 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.25□□□□□ -0.13
RxrbP28704 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.25□□□□□ -0.13
RxrbP28704 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RxrbP28704 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.25□□□□□ -0.13
RxrbP28704 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Gm5864-201ENSMUST00000202263 970 ntBASIC14.25□□□□□ -0.13
RxrbP28704 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Gm9182-201ENSMUST00000217829 639 ntBASIC14.25□□□□□ -0.13
RxrbP28704 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.25□□□□□ -0.13
RxrbP28704 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.25□□□□□ -0.13
RxrbP28704 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.25□□□□□ -0.13
RxrbP28704 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
RxrbP28704 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RxrbP28704 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.25□□□□□ -0.13
RxrbP28704 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.25□□□□□ -0.13
RxrbP28704 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RxrbP28704 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RxrbP28704 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
RxrbP28704 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
RxrbP28704 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.24□□□□□ -0.13
RxrbP28704 Gm45747-201ENSMUST00000212203 999 ntBASIC14.24□□□□□ -0.13
RxrbP28704 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.24□□□□□ -0.13
RxrbP28704 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RxrbP28704 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
RxrbP28704 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RxrbP28704 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RxrbP28704 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RxrbP28704 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RxrbP28704 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
RxrbP28704 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.23□□□□□ -0.13
RxrbP28704 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RxrbP28704 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
RxrbP28704 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.23□□□□□ -0.13
RxrbP28704 Gm10275-202ENSMUST00000168697 495 ntBASIC14.23□□□□□ -0.13
RxrbP28704 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.23□□□□□ -0.13
RxrbP28704 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.23□□□□□ -0.13
RxrbP28704 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.23□□□□□ -0.13
RxrbP28704 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.23□□□□□ -0.13
RxrbP28704 Gm10275-201ENSMUST00000092620 635 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms