Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.85□□□□□ -0.51
Col8a2P25318 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Col8a2P25318 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col8a2P25318 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.85□□□□□ -0.51
Col8a2P25318 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Col8a2P25318 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.85□□□□□ -0.51
Col8a2P25318 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.85□□□□□ -0.51
Col8a2P25318 Gm5866-201ENSMUST00000177881 973 ntBASIC11.85□□□□□ -0.51
Col8a2P25318 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Gm7730-201ENSMUST00000212486 454 ntBASIC11.85□□□□□ -0.51
Col8a2P25318 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.85□□□□□ -0.51
Col8a2P25318 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.85□□□□□ -0.51
Col8a2P25318 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Col8a2P25318 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Col8a2P25318 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col8a2P25318 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Col8a2P25318 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.85□□□□□ -0.51
Col8a2P25318 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col8a2P25318 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.84□□□□□ -0.51
Col8a2P25318 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Gm14042-201ENSMUST00000120139 833 ntBASIC11.84□□□□□ -0.51
Col8a2P25318 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.84□□□□□ -0.51
Col8a2P25318 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Col8a2P25318 Gm27838-201ENSMUST00000184829 128 ntBASIC11.84□□□□□ -0.51
Col8a2P25318 Gm42612-201ENSMUST00000197986 623 ntBASIC11.84□□□□□ -0.51
Col8a2P25318 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Gm43170-201ENSMUST00000199827 612 ntBASIC11.84□□□□□ -0.51
Col8a2P25318 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.84□□□□□ -0.51
Col8a2P25318 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.84□□□□□ -0.51
Col8a2P25318 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Col8a2P25318 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Col8a2P25318 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Col8a2P25318 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col8a2P25318 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.84□□□□□ -0.51
Col8a2P25318 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Col8a2P25318 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.84□□□□□ -0.51
Col8a2P25318 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Col8a2P25318 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col8a2P25318 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Col8a2P25318 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Col8a2P25318 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.83□□□□□ -0.52
Col8a2P25318 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Col8a2P25318 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Col8a2P25318 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col8a2P25318 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col8a2P25318 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.83□□□□□ -0.52
Col8a2P25318 Gm9229-201ENSMUST00000222777 126 ntBASIC11.83□□□□□ -0.52
Col8a2P25318 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.83□□□□□ -0.52
Col8a2P25318 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Col8a2P25318 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.83□□□□□ -0.52
Col8a2P25318 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms