Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm18041-201ENSMUST00000218210 618 ntBASIC13□□□□□ -0.33
Hmgn1P18608 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Acot6-202ENSMUST00000222921 3622 ntBASIC13□□□□□ -0.33
Hmgn1P18608 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Hmgn1P18608 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hmgn1P18608 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Gm37133-201ENSMUST00000192705 1922 ntBASIC13□□□□□ -0.33
Hmgn1P18608 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmgn1P18608 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.99□□□□□ -0.33
Hmgn1P18608 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hmgn1P18608 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.99□□□□□ -0.33
Hmgn1P18608 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Hmgn1P18608 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.99□□□□□ -0.33
Hmgn1P18608 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Hmgn1P18608 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hmgn1P18608 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Hmgn1P18608 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Hmgn1P18608 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Hmgn1P18608 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Hmgn1P18608 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.99□□□□□ -0.33
Hmgn1P18608 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.99□□□□□ -0.33
Hmgn1P18608 Gm10060-201ENSMUST00000212002 111 ntBASIC12.99□□□□□ -0.33
Hmgn1P18608 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.99□□□□□ -0.33
Hmgn1P18608 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.99□□□□□ -0.33
Hmgn1P18608 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Hmgn1P18608 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.99□□□□□ -0.33
Hmgn1P18608 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.99□□□□□ -0.33
Hmgn1P18608 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn1P18608 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hmgn1P18608 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hmgn1P18608 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.98□□□□□ -0.33
Hmgn1P18608 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hmgn1P18608 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hmgn1P18608 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Gm25925-201ENSMUST00000158314 306 ntBASIC12.98□□□□□ -0.33
Hmgn1P18608 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.98□□□□□ -0.33
Hmgn1P18608 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.98□□□□□ -0.33
Hmgn1P18608 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.98□□□□□ -0.33
Hmgn1P18608 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.98□□□□□ -0.33
Hmgn1P18608 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn1P18608 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.98□□□□□ -0.33
Hmgn1P18608 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.98□□□□□ -0.33
Hmgn1P18608 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hmgn1P18608 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hmgn1P18608 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn1P18608 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms