Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx1P13297 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx1P13297 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx1P13297 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Msx1P13297 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx1P13297 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx1P13297 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.5□□□□□ -0.25
Msx1P13297 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx1P13297 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Msx1P13297 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Msx1P13297 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx1P13297 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx1P13297 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msx1P13297 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Msx1P13297 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.49□□□□□ -0.25
Msx1P13297 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Msx1P13297 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.49□□□□□ -0.25
Msx1P13297 Gm11478-201ENSMUST00000117851 599 ntBASIC13.49□□□□□ -0.25
Msx1P13297 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.49□□□□□ -0.25
Msx1P13297 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Msx1P13297 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.49□□□□□ -0.25
Msx1P13297 Gm8515-201ENSMUST00000194852 576 ntBASIC13.49□□□□□ -0.25
Msx1P13297 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC13.49□□□□□ -0.25
Msx1P13297 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Msx1P13297 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Msx1P13297 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.49□□□□□ -0.25
Msx1P13297 Gm6218-201ENSMUST00000219812 628 ntBASIC13.49□□□□□ -0.25
Msx1P13297 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.49□□□□□ -0.25
Msx1P13297 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Msx1P13297 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Msx1P13297 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Msx1P13297 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.49□□□□□ -0.25
Msx1P13297 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Msx1P13297 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msx1P13297 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.49□□□□□ -0.25
Msx1P13297 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Msx1P13297 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.48□□□□□ -0.25
Msx1P13297 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Msx1P13297 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Gm24543-201ENSMUST00000103867 82 ntBASIC13.48□□□□□ -0.25
Msx1P13297 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.48□□□□□ -0.25
Msx1P13297 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.48□□□□□ -0.25
Msx1P13297 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Msx1P13297 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Msx1P13297 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.48□□□□□ -0.25
Msx1P13297 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Msx1P13297 Gm23984-201ENSMUST00000157139 203 ntBASIC13.48□□□□□ -0.25
Msx1P13297 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Gm9182-201ENSMUST00000217829 639 ntBASIC13.48□□□□□ -0.25
Msx1P13297 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Msx1P13297 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.48□□□□□ -0.25
Msx1P13297 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Msx1P13297 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.48□□□□□ -0.25
Msx1P13297 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Msx1P13297 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Msx1P13297 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Msx1P13297 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msx1P13297 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms