Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.76□□□□□ -0.53
Cxcl1P12850 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cxcl1P12850 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl1P12850 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.76□□□□□ -0.53
Cxcl1P12850 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Cxcl1P12850 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl1P12850 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl1P12850 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.76□□□□□ -0.53
Cxcl1P12850 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl1P12850 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl1P12850 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl1P12850 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl1P12850 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl1P12850 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cxcl1P12850 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.76□□□□□ -0.53
Cxcl1P12850 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cxcl1P12850 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cxcl1P12850 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl1P12850 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl1P12850 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.75□□□□□ -0.53
Cxcl1P12850 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.75□□□□□ -0.53
Cxcl1P12850 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.75□□□□□ -0.53
Cxcl1P12850 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl1P12850 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.75□□□□□ -0.53
Cxcl1P12850 Gm9103-201ENSMUST00000119371 405 ntBASIC11.75□□□□□ -0.53
Cxcl1P12850 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.75□□□□□ -0.53
Cxcl1P12850 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.75□□□□□ -0.53
Cxcl1P12850 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.75□□□□□ -0.53
Cxcl1P12850 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.75□□□□□ -0.53
Cxcl1P12850 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cxcl1P12850 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Cxcl1P12850 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl1P12850 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl1P12850 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl1P12850 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cxcl1P12850 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cxcl1P12850 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cxcl1P12850 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Cxcl1P12850 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.74□□□□□ -0.53
Cxcl1P12850 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cxcl1P12850 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cxcl1P12850 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cxcl1P12850 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cxcl1P12850 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms