Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.27■□□□□ 0.52
Hoxc9P09633 Gm45841-201ENSMUST00000207700 164 ntBASIC18.27■□□□□ 0.52
Hoxc9P09633 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hoxc9P09633 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxc9P09633 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxc9P09633 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hoxc9P09633 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
Hoxc9P09633 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC18.26■□□□□ 0.51
Hoxc9P09633 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Gm8062-201ENSMUST00000139696 444 ntBASIC18.26■□□□□ 0.51
Hoxc9P09633 Gm27731-201ENSMUST00000185192 107 ntBASIC18.26■□□□□ 0.51
Hoxc9P09633 Gm37424-201ENSMUST00000191727 561 ntBASIC18.26■□□□□ 0.51
Hoxc9P09633 Gm38223-201ENSMUST00000194484 695 ntBASIC18.26■□□□□ 0.51
Hoxc9P09633 AC166997.1-201ENSMUST00000225122 572 ntBASIC18.26■□□□□ 0.51
Hoxc9P09633 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC18.26■□□□□ 0.51
Hoxc9P09633 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.26■□□□□ 0.51
Hoxc9P09633 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hoxc9P09633 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hoxc9P09633 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC18.26■□□□□ 0.51
Hoxc9P09633 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Hoxc9P09633 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hoxc9P09633 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hoxc9P09633 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hoxc9P09633 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc9P09633 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.25■□□□□ 0.51
Hoxc9P09633 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Hoxc9P09633 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc9P09633 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC18.25■□□□□ 0.51
Hoxc9P09633 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc9P09633 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.25■□□□□ 0.51
Hoxc9P09633 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc9P09633 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc9P09633 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc9P09633 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc9P09633 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hoxc9P09633 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Hoxc9P09633 Gm13050-201ENSMUST00000122149 1345 ntBASIC18.24■□□□□ 0.51
Hoxc9P09633 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Hoxc9P09633 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc9P09633 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Hoxc9P09633 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Hoxc9P09633 Mir698-201ENSMUST00000102164 109 ntBASIC18.24■□□□□ 0.51
Hoxc9P09633 Gm15371-201ENSMUST00000117057 784 ntBASIC18.24■□□□□ 0.51
Hoxc9P09633 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.24■□□□□ 0.51
Hoxc9P09633 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC18.24■□□□□ 0.51
Hoxc9P09633 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Hoxc9P09633 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc9P09633 Gm42442-201ENSMUST00000197951 1133 ntBASIC18.24■□□□□ 0.51
Hoxc9P09633 AC131690.1-201ENSMUST00000218406 374 ntBASIC18.24■□□□□ 0.51
Hoxc9P09633 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC18.24■□□□□ 0.51
Hoxc9P09633 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc9P09633 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc9P09633 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc9P09633 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc9P09633 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc9P09633 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc9P09633 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hoxc9P09633 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc9P09633 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hoxc9P09633 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Hoxc9P09633 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hoxc9P09633 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.23■□□□□ 0.51
Hoxc9P09633 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Hoxc9P09633 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.23■□□□□ 0.51
Hoxc9P09633 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Hoxc9P09633 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC18.23■□□□□ 0.51
Hoxc9P09633 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Hoxc9P09633 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 Gm29649-201ENSMUST00000185649 419 ntBASIC18.23■□□□□ 0.51
Hoxc9P09633 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hoxc9P09633 Gm38671-201ENSMUST00000200573 130 ntBASIC18.23■□□□□ 0.51
Hoxc9P09633 Gm45331-201ENSMUST00000209868 554 ntBASIC18.23■□□□□ 0.51
Hoxc9P09633 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Hoxc9P09633 Gm8598-201ENSMUST00000221184 836 ntBASIC18.23■□□□□ 0.51
Hoxc9P09633 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms