Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxb3P09026 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Gm5187-201ENSMUST00000117317 991 ntBASIC14.09□□□□□ -0.15
Hoxb3P09026 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Gm5523-201ENSMUST00000180415 997 ntBASIC14.09□□□□□ -0.15
Hoxb3P09026 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.09□□□□□ -0.15
Hoxb3P09026 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Gm6916-202ENSMUST00000205523 195 ntBASIC14.09□□□□□ -0.15
Hoxb3P09026 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.09□□□□□ -0.15
Hoxb3P09026 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hoxb3P09026 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxb3P09026 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxb3P09026 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Hoxb3P09026 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxb3P09026 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxb3P09026 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxb3P09026 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxb3P09026 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Hoxb3P09026 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxb3P09026 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hoxb3P09026 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hoxb3P09026 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hoxb3P09026 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.08□□□□□ -0.16
Hoxb3P09026 Gm23958-201ENSMUST00000157207 105 ntBASIC14.08□□□□□ -0.16
Hoxb3P09026 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxb3P09026 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hoxb3P09026 Gm27516-201ENSMUST00000184237 98 ntBASIC14.08□□□□□ -0.16
Hoxb3P09026 Gm43947-201ENSMUST00000203019 959 ntBASIC14.08□□□□□ -0.16
Hoxb3P09026 Gm5363-201ENSMUST00000211927 938 ntBASIC14.08□□□□□ -0.16
Hoxb3P09026 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.08□□□□□ -0.16
Hoxb3P09026 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.08□□□□□ -0.16
Hoxb3P09026 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.08□□□□□ -0.16
Hoxb3P09026 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hoxb3P09026 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxb3P09026 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Hoxb3P09026 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Hoxb3P09026 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Hoxb3P09026 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.07□□□□□ -0.16
Hoxb3P09026 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxb3P09026 Gm23931-201ENSMUST00000103842 109 ntBASIC14.07□□□□□ -0.16
Hoxb3P09026 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.07□□□□□ -0.16
Hoxb3P09026 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms