Protein–RNA interactions for Protein: P09021

Hoxa5, Homeobox protein Hox-A5, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa5P09021 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa5P09021 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa5P09021 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Hoxa5P09021 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.25□□□□□ -0.61
Hoxa5P09021 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa5P09021 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hoxa5P09021 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.24□□□□□ -0.61
Hoxa5P09021 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.24□□□□□ -0.61
Hoxa5P09021 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hoxa5P09021 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Hoxa5P09021 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Gm28033-201ENSMUST00000184224 96 ntBASIC11.23□□□□□ -0.61
Hoxa5P09021 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.23□□□□□ -0.61
Hoxa5P09021 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.23□□□□□ -0.61
Hoxa5P09021 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.23□□□□□ -0.61
Hoxa5P09021 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.23□□□□□ -0.61
Hoxa5P09021 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxa5P09021 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Hoxa5P09021 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa5P09021 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxa5P09021 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms