Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
Sod1P08228 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Gm13392-201ENSMUST00000117708 150 ntBASIC13.24□□□□□ -0.29
Sod1P08228 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.24□□□□□ -0.29
Sod1P08228 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.24□□□□□ -0.29
Sod1P08228 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sod1P08228 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sod1P08228 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sod1P08228 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sod1P08228 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sod1P08228 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sod1P08228 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sod1P08228 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.23□□□□□ -0.29
Sod1P08228 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Sod1P08228 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sod1P08228 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Mir6420-201ENSMUST00000185032 102 ntBASIC13.23□□□□□ -0.29
Sod1P08228 Gm27731-201ENSMUST00000185192 107 ntBASIC13.23□□□□□ -0.29
Sod1P08228 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.23□□□□□ -0.29
Sod1P08228 Gm37424-201ENSMUST00000191727 561 ntBASIC13.23□□□□□ -0.29
Sod1P08228 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.23□□□□□ -0.29
Sod1P08228 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.23□□□□□ -0.29
Sod1P08228 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.23□□□□□ -0.29
Sod1P08228 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.23□□□□□ -0.29
Sod1P08228 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Sod1P08228 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.23□□□□□ -0.29
Sod1P08228 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.23□□□□□ -0.29
Sod1P08228 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Sod1P08228 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Sod1P08228 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sod1P08228 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sod1P08228 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sod1P08228 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sod1P08228 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.22□□□□□ -0.29
Sod1P08228 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sod1P08228 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Sod1P08228 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.22□□□□□ -0.29
Sod1P08228 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.22□□□□□ -0.29
Sod1P08228 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Sod1P08228 Gm29649-201ENSMUST00000185649 419 ntBASIC13.22□□□□□ -0.29
Sod1P08228 Gm38671-201ENSMUST00000200573 130 ntBASIC13.22□□□□□ -0.29
Sod1P08228 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Gm5161-201ENSMUST00000075243 853 ntBASIC13.22□□□□□ -0.29
Sod1P08228 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.22□□□□□ -0.29
Sod1P08228 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sod1P08228 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sod1P08228 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms