Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TnfP06804 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.04■□□□□ -0
TnfP06804 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.04■□□□□ -0
TnfP06804 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TnfP06804 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TnfP06804 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TnfP06804 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TnfP06804 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.04■□□□□ -0
TnfP06804 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.04■□□□□ -0
TnfP06804 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TnfP06804 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TnfP06804 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TnfP06804 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.04■□□□□ -0
TnfP06804 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TnfP06804 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TnfP06804 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.03■□□□□ -0
TnfP06804 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
TnfP06804 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.03■□□□□ -0
TnfP06804 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TnfP06804 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TnfP06804 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TnfP06804 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.03■□□□□ -0
TnfP06804 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.03■□□□□ -0
TnfP06804 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.03■□□□□ -0
TnfP06804 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.03■□□□□ -0
TnfP06804 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.03■□□□□ -0
TnfP06804 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.03■□□□□ -0
TnfP06804 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TnfP06804 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TnfP06804 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TnfP06804 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TnfP06804 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
TnfP06804 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TnfP06804 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.02■□□□□ -0
TnfP06804 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.02■□□□□ -0
TnfP06804 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.02■□□□□ -0
TnfP06804 Gm37917-201ENSMUST00000194711 392 ntBASIC15.02■□□□□ -0
TnfP06804 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.02■□□□□ -0
TnfP06804 Gm5186-201ENSMUST00000218781 920 ntBASIC15.02■□□□□ -0
TnfP06804 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.02■□□□□ -0
TnfP06804 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.02■□□□□ -0
TnfP06804 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TnfP06804 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.02■□□□□ -0
TnfP06804 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.02□□□□□ -0.01
TnfP06804 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TnfP06804 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TnfP06804 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TnfP06804 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TnfP06804 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
TnfP06804 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.02□□□□□ -0.01
TnfP06804 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TnfP06804 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.02□□□□□ -0.01
TnfP06804 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TnfP06804 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TnfP06804 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.01□□□□□ -0.01
TnfP06804 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Gm23984-201ENSMUST00000157139 203 ntBASIC15.01□□□□□ -0.01
TnfP06804 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.01□□□□□ -0.01
TnfP06804 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.01□□□□□ -0.01
TnfP06804 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.01□□□□□ -0.01
TnfP06804 Gm9794-201ENSMUST00000202370 423 ntBASIC15.01□□□□□ -0.01
TnfP06804 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Gm17795-201ENSMUST00000214505 757 ntBASIC15.01□□□□□ -0.01
TnfP06804 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.01□□□□□ -0.01
TnfP06804 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.01□□□□□ -0.01
TnfP06804 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TnfP06804 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TnfP06804 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TnfP06804 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.01□□□□□ -0.01
TnfP06804 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TnfP06804 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms