Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfrbP05622 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfrbP05622 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PdgfrbP05622 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.36□□□□□ -0.11
PdgfrbP05622 Gm12882-201ENSMUST00000121696 517 ntBASIC14.36□□□□□ -0.11
PdgfrbP05622 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.36□□□□□ -0.11
PdgfrbP05622 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
PdgfrbP05622 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfrbP05622 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PdgfrbP05622 Gm10253-201ENSMUST00000194270 940 ntBASIC14.36□□□□□ -0.11
PdgfrbP05622 Gm7774-201ENSMUST00000200064 533 ntBASIC14.36□□□□□ -0.11
PdgfrbP05622 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfrbP05622 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfrbP05622 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfrbP05622 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.36□□□□□ -0.11
PdgfrbP05622 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.36□□□□□ -0.11
PdgfrbP05622 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfrbP05622 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.36□□□□□ -0.11
PdgfrbP05622 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfrbP05622 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PdgfrbP05622 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.35□□□□□ -0.11
PdgfrbP05622 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PdgfrbP05622 Gm14701-201ENSMUST00000117156 348 ntBASIC14.35□□□□□ -0.11
PdgfrbP05622 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.35□□□□□ -0.11
PdgfrbP05622 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.35□□□□□ -0.11
PdgfrbP05622 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Gm28196-201ENSMUST00000187719 640 ntBASIC14.35□□□□□ -0.11
PdgfrbP05622 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.35□□□□□ -0.11
PdgfrbP05622 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.35□□□□□ -0.11
PdgfrbP05622 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PdgfrbP05622 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PdgfrbP05622 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PdgfrbP05622 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PdgfrbP05622 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PdgfrbP05622 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PdgfrbP05622 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Mir449b-201ENSMUST00000104833 80 ntBASIC14.34□□□□□ -0.11
PdgfrbP05622 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PdgfrbP05622 Gm27631-201ENSMUST00000184163 466 ntBASIC14.34□□□□□ -0.11
PdgfrbP05622 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Gm8396-201ENSMUST00000057361 823 ntBASIC14.34□□□□□ -0.11
PdgfrbP05622 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PdgfrbP05622 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PdgfrbP05622 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PdgfrbP05622 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.34□□□□□ -0.11
PdgfrbP05622 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PdgfrbP05622 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
PdgfrbP05622 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PdgfrbP05622 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
PdgfrbP05622 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PdgfrbP05622 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PdgfrbP05622 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PdgfrbP05622 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PdgfrbP05622 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfrbP05622 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfrbP05622 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PdgfrbP05622 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms