Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.41□□□□□ -0.26
Krt1P04104 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.41□□□□□ -0.26
Krt1P04104 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Krt1P04104 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Krt1P04104 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Krt1P04104 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.4□□□□□ -0.26
Krt1P04104 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Krt1P04104 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.4□□□□□ -0.26
Krt1P04104 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Krt1P04104 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.4□□□□□ -0.26
Krt1P04104 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Krt1P04104 Gm6433-201ENSMUST00000118634 875 ntBASIC13.4□□□□□ -0.26
Krt1P04104 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Krt1P04104 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.4□□□□□ -0.26
Krt1P04104 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Krt1P04104 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Krt1P04104 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.4□□□□□ -0.26
Krt1P04104 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.4□□□□□ -0.26
Krt1P04104 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt1P04104 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.4□□□□□ -0.27
Krt1P04104 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Krt1P04104 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt1P04104 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.39□□□□□ -0.27
Krt1P04104 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt1P04104 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Krt1P04104 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Krt1P04104 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Gm15565-201ENSMUST00000118890 427 ntBASIC13.39□□□□□ -0.27
Krt1P04104 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Krt1P04104 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.39□□□□□ -0.27
Krt1P04104 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt1P04104 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Krt1P04104 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.39□□□□□ -0.27
Krt1P04104 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt1P04104 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Krt1P04104 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt1P04104 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt1P04104 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt1P04104 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Krt1P04104 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt1P04104 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt1P04104 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt1P04104 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt1P04104 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt1P04104 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Krt1P04104 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Krt1P04104 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt1P04104 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms