Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm24158-201ENSMUST00000175263 71 ntBASIC12.21□□□□□ -0.45
H3f3cP02301 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.21□□□□□ -0.45
H3f3cP02301 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.21□□□□□ -0.45
H3f3cP02301 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.21□□□□□ -0.45
H3f3cP02301 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.21□□□□□ -0.45
H3f3cP02301 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H3f3cP02301 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
H3f3cP02301 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3cP02301 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
H3f3cP02301 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3cP02301 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3cP02301 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3cP02301 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.21□□□□□ -0.46
H3f3cP02301 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3cP02301 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3cP02301 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3cP02301 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3cP02301 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3cP02301 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.21□□□□□ -0.46
H3f3cP02301 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H3f3cP02301 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.2□□□□□ -0.46
H3f3cP02301 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.2□□□□□ -0.46
H3f3cP02301 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.2□□□□□ -0.46
H3f3cP02301 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.2□□□□□ -0.46
H3f3cP02301 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.2□□□□□ -0.46
H3f3cP02301 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Gm14701-201ENSMUST00000117156 348 ntBASIC12.2□□□□□ -0.46
H3f3cP02301 Gm15693-201ENSMUST00000120470 637 ntBASIC12.2□□□□□ -0.46
H3f3cP02301 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Gm29541-201ENSMUST00000191351 678 ntBASIC12.2□□□□□ -0.46
H3f3cP02301 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.2□□□□□ -0.46
H3f3cP02301 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.2□□□□□ -0.46
H3f3cP02301 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H3f3cP02301 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.2□□□□□ -0.46
H3f3cP02301 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H3f3cP02301 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
H3f3cP02301 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
H3f3cP02301 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.19□□□□□ -0.46
H3f3cP02301 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.19□□□□□ -0.46
H3f3cP02301 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
H3f3cP02301 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.19□□□□□ -0.46
H3f3cP02301 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
H3f3cP02301 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H3f3cP02301 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
H3f3cP02301 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
H3f3cP02301 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
H3f3cP02301 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H3f3cP02301 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms