Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
P01852 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01852 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01852 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13□□□□□ -0.33
P01852 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
P01852 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P01852 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01852 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13□□□□□ -0.33
P01852 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13□□□□□ -0.33
P01852 Gm27622-201ENSMUST00000183779 60 ntBASIC13□□□□□ -0.33
P01852 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01852 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13□□□□□ -0.33
P01852 AC126408.1-201ENSMUST00000225184 523 ntBASIC13□□□□□ -0.33
P01852 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
P01852 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01852 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
P01852 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13□□□□□ -0.33
P01852 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P01852 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.99□□□□□ -0.33
P01852 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Carlr-201ENSMUST00000181515 2574 ntBASIC12.99□□□□□ -0.33
P01852 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.99□□□□□ -0.33
P01852 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.99□□□□□ -0.33
P01852 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
P01852 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.99□□□□□ -0.33
P01852 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.99□□□□□ -0.33
P01852 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.99□□□□□ -0.33
P01852 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
P01852 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
P01852 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
P01852 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
P01852 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
P01852 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
P01852 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
P01852 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.98□□□□□ -0.33
P01852 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.98□□□□□ -0.33
P01852 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
P01852 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
P01852 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
P01852 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.98□□□□□ -0.33
P01852 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms