Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.37□□□□□ -0.75
TcraP01849 Gm27357-201ENSMUST00000183754 135 ntBASIC10.37□□□□□ -0.75
TcraP01849 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
TcraP01849 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.37□□□□□ -0.75
TcraP01849 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.37□□□□□ -0.75
TcraP01849 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC10.37□□□□□ -0.75
TcraP01849 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.37□□□□□ -0.75
TcraP01849 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.37□□□□□ -0.75
TcraP01849 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
TcraP01849 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
TcraP01849 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.37□□□□□ -0.75
TcraP01849 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
TcraP01849 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
TcraP01849 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
TcraP01849 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
TcraP01849 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
TcraP01849 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
TcraP01849 Gm17807-201ENSMUST00000186869 298 ntBASIC10.36□□□□□ -0.75
TcraP01849 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.36□□□□□ -0.75
TcraP01849 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.36□□□□□ -0.75
TcraP01849 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
TcraP01849 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.36□□□□□ -0.75
TcraP01849 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TcraP01849 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.35□□□□□ -0.75
TcraP01849 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
TcraP01849 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
TcraP01849 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
TcraP01849 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
TcraP01849 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
TcraP01849 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
TcraP01849 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
TcraP01849 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.35□□□□□ -0.75
TcraP01849 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
TcraP01849 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Gm12644-201ENSMUST00000119935 606 ntBASIC10.35□□□□□ -0.75
TcraP01849 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
TcraP01849 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC10.35□□□□□ -0.75
TcraP01849 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms