Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Gm11025-201ENSMUST00000140773 466 ntBASIC10.72□□□□□ -0.69
P01739 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.72□□□□□ -0.69
P01739 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.72□□□□□ -0.69
P01739 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.72□□□□□ -0.69
P01739 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.72□□□□□ -0.69
P01739 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.72□□□□□ -0.69
P01739 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
P01739 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
P01739 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
P01739 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.71□□□□□ -0.69
P01739 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.71□□□□□ -0.69
P01739 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.71□□□□□ -0.69
P01739 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.71□□□□□ -0.69
P01739 Gm10275-202ENSMUST00000168697 495 ntBASIC10.71□□□□□ -0.69
P01739 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.71□□□□□ -0.69
P01739 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.71□□□□□ -0.69
P01739 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
P01739 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.71□□□□□ -0.69
P01739 AC131187.1-201ENSMUST00000224567 809 ntBASIC10.71□□□□□ -0.69
P01739 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
P01739 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Gm10275-201ENSMUST00000092620 635 ntBASIC10.71□□□□□ -0.69
P01739 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
P01739 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01739 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01739 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01739 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01739 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
P01739 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01739 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01739 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.71□□□□□ -0.7
P01739 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01739 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01739 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
P01739 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
P01739 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
P01739 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
P01739 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
P01739 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.7□□□□□ -0.7
P01739 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10.7□□□□□ -0.7
P01739 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P01739 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms