Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Gm42627-201ENSMUST00000197347 224 ntBASIC13.13□□□□□ -0.31
Tnfrsf17O88472 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Cts7-204ENSMUST00000225321 1257 ntBASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf17O88472 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Gm26464-201ENSMUST00000157094 305 ntBASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Gm18935-201ENSMUST00000212692 664 ntBASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Nsd1-205ENSMUST00000224693 852 ntBASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf17O88472 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Gm27331-201ENSMUST00000183705 60 ntBASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Gm37259-201ENSMUST00000193903 849 ntBASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Gm43138-201ENSMUST00000199123 708 ntBASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Gm9368-201ENSMUST00000219348 831 ntBASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.11□□□□□ -0.31
Tnfrsf17O88472 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf17O88472 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.1□□□□□ -0.31
Tnfrsf17O88472 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf17O88472 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf17O88472 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf17O88472 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf17O88472 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf17O88472 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms