Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cfdp1O88271 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfdp1O88271 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.68■□□□□ 0.42
Cfdp1O88271 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfdp1O88271 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cfdp1O88271 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfdp1O88271 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfdp1O88271 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cfdp1O88271 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.68■□□□□ 0.42
Cfdp1O88271 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfdp1O88271 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfdp1O88271 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cfdp1O88271 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.67■□□□□ 0.42
Cfdp1O88271 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.67■□□□□ 0.42
Cfdp1O88271 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cfdp1O88271 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.67■□□□□ 0.42
Cfdp1O88271 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.67■□□□□ 0.42
Cfdp1O88271 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Cfdp1O88271 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cfdp1O88271 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.67■□□□□ 0.42
Cfdp1O88271 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cfdp1O88271 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cfdp1O88271 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.66■□□□□ 0.42
Cfdp1O88271 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.66■□□□□ 0.42
Cfdp1O88271 Gm44608-201ENSMUST00000206827 855 ntBASIC17.66■□□□□ 0.42
Cfdp1O88271 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cfdp1O88271 Gm6218-201ENSMUST00000219812 628 ntBASIC17.66■□□□□ 0.42
Cfdp1O88271 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.66■□□□□ 0.42
Cfdp1O88271 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Cfdp1O88271 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.66■□□□□ 0.42
Cfdp1O88271 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.66■□□□□ 0.42
Cfdp1O88271 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cfdp1O88271 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cfdp1O88271 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cfdp1O88271 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cfdp1O88271 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.65■□□□□ 0.42
Cfdp1O88271 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cfdp1O88271 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Cfdp1O88271 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.65■□□□□ 0.42
Cfdp1O88271 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.65■□□□□ 0.42
Cfdp1O88271 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cfdp1O88271 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cfdp1O88271 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cfdp1O88271 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
Cfdp1O88271 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfdp1O88271 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfdp1O88271 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cfdp1O88271 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.64■□□□□ 0.41
Cfdp1O88271 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cfdp1O88271 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfdp1O88271 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfdp1O88271 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms