Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Alx3O70137 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Alx3O70137 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Alx3O70137 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.97□□□□□ -0.33
Alx3O70137 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.97□□□□□ -0.33
Alx3O70137 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.97□□□□□ -0.33
Alx3O70137 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.97□□□□□ -0.33
Alx3O70137 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.97□□□□□ -0.33
Alx3O70137 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.97□□□□□ -0.33
Alx3O70137 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.97□□□□□ -0.33
Alx3O70137 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Gm45747-201ENSMUST00000212203 999 ntBASIC12.97□□□□□ -0.33
Alx3O70137 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Psmb5-202ENSMUST00000227257 622 ntBASIC12.97□□□□□ -0.33
Alx3O70137 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Alx3O70137 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Alx3O70137 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Alx3O70137 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Alx3O70137 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Alx3O70137 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Alx3O70137 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Alx3O70137 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Alx3O70137 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.96□□□□□ -0.33
Alx3O70137 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Alx3O70137 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Alx3O70137 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Alx3O70137 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.96□□□□□ -0.33
Alx3O70137 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Alx3O70137 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.96□□□□□ -0.33
Alx3O70137 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.96□□□□□ -0.33
Alx3O70137 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.96□□□□□ -0.33
Alx3O70137 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Alx3O70137 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Gm25116-201ENSMUST00000157191 122 ntBASIC12.96□□□□□ -0.33
Alx3O70137 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC12.96□□□□□ -0.33
Alx3O70137 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Alx3O70137 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Alx3O70137 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Alx3O70137 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.96□□□□□ -0.33
Alx3O70137 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.96□□□□□ -0.33
Alx3O70137 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Alx3O70137 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Alx3O70137 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Alx3O70137 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Alx3O70137 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Alx3O70137 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Alx3O70137 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Alx3O70137 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Alx3O70137 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Alx3O70137 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Alx3O70137 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Alx3O70137 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Alx3O70137 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Alx3O70137 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Alx3O70137 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Alx3O70137 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms