Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pde6dO55057 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.19□□□□□ -0.62
Pde6dO55057 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.18□□□□□ -0.62
Pde6dO55057 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pde6dO55057 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.18□□□□□ -0.62
Pde6dO55057 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pde6dO55057 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Pde6dO55057 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Pde6dO55057 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.18□□□□□ -0.62
Pde6dO55057 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.18□□□□□ -0.62
Pde6dO55057 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.18□□□□□ -0.62
Pde6dO55057 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pde6dO55057 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Gm5587-201ENSMUST00000206270 674 ntBASIC11.18□□□□□ -0.62
Pde6dO55057 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.18□□□□□ -0.62
Pde6dO55057 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC11.18□□□□□ -0.62
Pde6dO55057 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.18□□□□□ -0.62
Pde6dO55057 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pde6dO55057 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pde6dO55057 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.18□□□□□ -0.62
Pde6dO55057 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pde6dO55057 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pde6dO55057 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.17□□□□□ -0.62
Pde6dO55057 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Pde6dO55057 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Pde6dO55057 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pde6dO55057 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.17□□□□□ -0.62
Pde6dO55057 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.17□□□□□ -0.62
Pde6dO55057 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.17□□□□□ -0.62
Pde6dO55057 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.17□□□□□ -0.62
Pde6dO55057 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pde6dO55057 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.17□□□□□ -0.62
Pde6dO55057 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.17□□□□□ -0.62
Pde6dO55057 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
Pde6dO55057 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.17□□□□□ -0.62
Pde6dO55057 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pde6dO55057 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pde6dO55057 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.17□□□□□ -0.62
Pde6dO55057 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pde6dO55057 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pde6dO55057 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pde6dO55057 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.16□□□□□ -0.62
Pde6dO55057 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pde6dO55057 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.16□□□□□ -0.62
Pde6dO55057 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pde6dO55057 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms