Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.29■□□□□ 0.2
Copb2O55029 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Gm6912-201ENSMUST00000117218 544 ntBASIC16.29■□□□□ 0.2
Copb2O55029 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Copb2O55029 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.29■□□□□ 0.2
Copb2O55029 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.29■□□□□ 0.2
Copb2O55029 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.29■□□□□ 0.2
Copb2O55029 Gm6745-201ENSMUST00000199216 526 ntBASIC16.29■□□□□ 0.2
Copb2O55029 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.29■□□□□ 0.2
Copb2O55029 Gm6180-201ENSMUST00000065243 498 ntBASIC16.29■□□□□ 0.2
Copb2O55029 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Copb2O55029 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Copb2O55029 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Copb2O55029 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.29■□□□□ 0.2
Copb2O55029 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.29■□□□□ 0.2
Copb2O55029 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Copb2O55029 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.29■□□□□ 0.2
Copb2O55029 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Copb2O55029 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Copb2O55029 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Copb2O55029 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Gm21470-201ENSMUST00000187680 696 ntBASIC16.28■□□□□ 0.2
Copb2O55029 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.28■□□□□ 0.2
Copb2O55029 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.28■□□□□ 0.2
Copb2O55029 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.28■□□□□ 0.2
Copb2O55029 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.28■□□□□ 0.2
Copb2O55029 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.28■□□□□ 0.2
Copb2O55029 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.28■□□□□ 0.2
Copb2O55029 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Copb2O55029 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.28■□□□□ 0.2
Copb2O55029 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Copb2O55029 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Copb2O55029 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Copb2O55029 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Copb2O55029 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Copb2O55029 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Copb2O55029 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.27■□□□□ 0.2
Copb2O55029 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Copb2O55029 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Copb2O55029 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.27■□□□□ 0.2
Copb2O55029 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Copb2O55029 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Copb2O55029 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Copb2O55029 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Copb2O55029 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Copb2O55029 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Copb2O55029 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Copb2O55029 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Copb2O55029 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Copb2O55029 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Copb2O55029 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Copb2O55029 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Copb2O55029 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Copb2O55029 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Copb2O55029 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Copb2O55029 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Copb2O55029 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Copb2O55029 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Copb2O55029 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Copb2O55029 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Copb2O55029 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Copb2O55029 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Copb2O55029 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Copb2O55029 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.26■□□□□ 0.19
Copb2O55029 Gm12138-201ENSMUST00000122180 951 ntBASIC16.26■□□□□ 0.19
Copb2O55029 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.26■□□□□ 0.19
Copb2O55029 Gm37917-201ENSMUST00000194711 392 ntBASIC16.26■□□□□ 0.19
Copb2O55029 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms