Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.87□□□□□ -0.35
Dkk1O54908 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Dkk1O54908 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Dkk1O54908 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Dkk1O54908 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.87□□□□□ -0.35
Dkk1O54908 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.87□□□□□ -0.35
Dkk1O54908 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.87□□□□□ -0.35
Dkk1O54908 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 AC125487.2-201ENSMUST00000219810 1300 ntBASIC12.87□□□□□ -0.35
Dkk1O54908 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Dkk1O54908 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 AC132833.1-202ENSMUST00000228875 1690 ntBASIC12.86□□□□□ -0.35
Dkk1O54908 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Dkk1O54908 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Dkk1O54908 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Dkk1O54908 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Dkk1O54908 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.86□□□□□ -0.35
Dkk1O54908 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.86□□□□□ -0.35
Dkk1O54908 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.86□□□□□ -0.35
Dkk1O54908 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Gm14335-201ENSMUST00000119165 810 ntBASIC12.86□□□□□ -0.35
Dkk1O54908 Gm14054-201ENSMUST00000120744 704 ntBASIC12.86□□□□□ -0.35
Dkk1O54908 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC12.86□□□□□ -0.35
Dkk1O54908 Mir3113-201ENSMUST00000175478 76 ntBASIC12.86□□□□□ -0.35
Dkk1O54908 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Dkk1O54908 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC12.86□□□□□ -0.35
Dkk1O54908 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.86□□□□□ -0.35
Dkk1O54908 Gm5251-201ENSMUST00000188959 472 ntBASIC12.86□□□□□ -0.35
Dkk1O54908 Gm32999-201ENSMUST00000192693 562 ntBASIC12.86□□□□□ -0.35
Dkk1O54908 Ighv8-1-201ENSMUST00000194897 291 ntBASIC12.86□□□□□ -0.35
Dkk1O54908 Gm42782-201ENSMUST00000197286 522 ntBASIC12.86□□□□□ -0.35
Dkk1O54908 Gm18290-201ENSMUST00000202900 844 ntBASIC12.86□□□□□ -0.35
Dkk1O54908 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.86□□□□□ -0.35
Dkk1O54908 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.86□□□□□ -0.35
Dkk1O54908 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.86□□□□□ -0.35
Dkk1O54908 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.86□□□□□ -0.35
Dkk1O54908 AC154528.3-201ENSMUST00000228011 679 ntBASIC12.86□□□□□ -0.35
Dkk1O54908 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Dkk1O54908 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Dkk1O54908 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Dkk1O54908 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.86□□□□□ -0.35
Dkk1O54908 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Dkk1O54908 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Tefm-201ENSMUST00000050207 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Dkk1O54908 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.85□□□□□ -0.35
Dkk1O54908 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Dkk1O54908 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Dkk1O54908 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dkk1O54908 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dkk1O54908 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Dkk1O54908 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Dkk1O54908 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dkk1O54908 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Dkk1O54908 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dkk1O54908 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Dkk1O54908 Gm13874-202ENSMUST00000135348 941 ntTSL 3 BASIC12.85□□□□□ -0.35
Dkk1O54908 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Dkk1O54908 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Dkk1O54908 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Dkk1O54908 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms