Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phox2bO35690 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phox2bO35690 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Phox2bO35690 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phox2bO35690 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Phox2bO35690 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.35□□□□□ -0.11
Phox2bO35690 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phox2bO35690 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phox2bO35690 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Phox2bO35690 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Phox2bO35690 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Phox2bO35690 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phox2bO35690 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Phox2bO35690 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.35□□□□□ -0.11
Phox2bO35690 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.34□□□□□ -0.11
Phox2bO35690 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Phox2bO35690 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Phox2bO35690 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.34□□□□□ -0.11
Phox2bO35690 Gm15782-201ENSMUST00000121073 445 ntBASIC14.34□□□□□ -0.11
Phox2bO35690 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.34□□□□□ -0.11
Phox2bO35690 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC14.34□□□□□ -0.11
Phox2bO35690 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Phox2bO35690 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Phox2bO35690 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.34□□□□□ -0.11
Phox2bO35690 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Phox2bO35690 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Phox2bO35690 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.33□□□□□ -0.11
Phox2bO35690 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Phox2bO35690 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Phox2bO35690 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Phox2bO35690 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Phox2bO35690 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Phox2bO35690 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Phox2bO35690 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Phox2bO35690 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.33□□□□□ -0.12
Phox2bO35690 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.33□□□□□ -0.12
Phox2bO35690 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.33□□□□□ -0.12
Phox2bO35690 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC14.33□□□□□ -0.12
Phox2bO35690 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Gm13350-201ENSMUST00000120519 479 ntBASIC14.33□□□□□ -0.12
Phox2bO35690 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Mir7070-201ENSMUST00000183657 86 ntBASIC14.33□□□□□ -0.12
Phox2bO35690 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.33□□□□□ -0.12
Phox2bO35690 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.33□□□□□ -0.12
Phox2bO35690 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Phox2bO35690 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.32□□□□□ -0.12
Phox2bO35690 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phox2bO35690 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phox2bO35690 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.32□□□□□ -0.12
Phox2bO35690 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phox2bO35690 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phox2bO35690 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phox2bO35690 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phox2bO35690 Gm23931-201ENSMUST00000103842 109 ntBASIC14.32□□□□□ -0.12
Phox2bO35690 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Phox2bO35690 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Phox2bO35690 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phox2bO35690 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Phox2bO35690 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.32□□□□□ -0.12
Phox2bO35690 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Phox2bO35690 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Phox2bO35690 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms