Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.37□□□□□ -0.27
Cx3cl1O35188 Gm6222-201ENSMUST00000120787 396 ntBASIC13.37□□□□□ -0.27
Cx3cl1O35188 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Gm28630-201ENSMUST00000187806 498 ntBASIC13.37□□□□□ -0.27
Cx3cl1O35188 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.37□□□□□ -0.27
Cx3cl1O35188 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cl1O35188 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Gm27622-201ENSMUST00000183779 60 ntBASIC13.36□□□□□ -0.27
Cx3cl1O35188 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.36□□□□□ -0.27
Cx3cl1O35188 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.36□□□□□ -0.27
Cx3cl1O35188 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cl1O35188 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.35□□□□□ -0.27
Cx3cl1O35188 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.35□□□□□ -0.27
Cx3cl1O35188 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Gm25144-201ENSMUST00000179561 110 ntBASIC13.35□□□□□ -0.27
Cx3cl1O35188 Gm25352-201ENSMUST00000179815 110 ntBASIC13.35□□□□□ -0.27
Cx3cl1O35188 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.35□□□□□ -0.27
Cx3cl1O35188 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cx3cl1O35188 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms