Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Gm34391-201ENSMUST00000203706 907 ntBASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Gm6376-201ENSMUST00000209407 580 ntBASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Shisa8J3QNX5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa8J3QNX5 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa8J3QNX5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Shisa8J3QNX5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa8J3QNX5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa8J3QNX5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa8J3QNX5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa8J3QNX5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa8J3QNX5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Shisa8J3QNX5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa8J3QNX5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa8J3QNX5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shisa8J3QNX5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Gm7230-201ENSMUST00000173026 815 ntBASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shisa8J3QNX5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Gm28033-201ENSMUST00000184224 96 ntBASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Ank2-226ENSMUST00000189368 339 ntBASIC12.94□□□□□ -0.34
Shisa8J3QNX5 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.94□□□□□ -0.34
Shisa8J3QNX5 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms