Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp6G5E8P0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp6G5E8P0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp6G5E8P0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp6G5E8P0 Gm37411-201ENSMUST00000194180 2282 ntBASIC19.36■□□□□ 0.69
Tubgcp6G5E8P0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp6G5E8P0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tubgcp6G5E8P0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Gm9368-201ENSMUST00000219348 831 ntBASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 AC154462.2-201ENSMUST00000227519 370 ntBASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tubgcp6G5E8P0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Gm45760-201ENSMUST00000212190 1782 ntBASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Gm42471-201ENSMUST00000201457 1865 ntBASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Gm15371-201ENSMUST00000117057 784 ntBASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tubgcp6G5E8P0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Tubgcp6G5E8P0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tubgcp6G5E8P0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tubgcp6G5E8P0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC19.33■□□□□ 0.69
Tubgcp6G5E8P0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tubgcp6G5E8P0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC19.33■□□□□ 0.69
Tubgcp6G5E8P0 Gm6159-201ENSMUST00000191249 1724 ntBASIC19.33■□□□□ 0.69
Tubgcp6G5E8P0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Gm43138-201ENSMUST00000199123 708 ntBASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC19.33■□□□□ 0.68
Tubgcp6G5E8P0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Gm8584-201ENSMUST00000171982 758 ntBASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Gm7118-201ENSMUST00000200167 1003 ntBASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Gm9124-201ENSMUST00000191789 1092 ntBASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Gm9113-201ENSMUST00000192510 1018 ntBASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Gm9131-201ENSMUST00000193557 1089 ntBASIC19.32■□□□□ 0.68
Tubgcp6G5E8P0 Gm9121-201ENSMUST00000193749 1071 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms