Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh11xF6ZNL5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh11xF6ZNL5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Gm15693-201ENSMUST00000120470 637 ntBASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Mir125a-201ENSMUST00000083545 68 ntBASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh11xF6ZNL5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Gm5566-201ENSMUST00000116118 459 ntBASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh11xF6ZNL5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh11xF6ZNL5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms