Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.97■□□□□ 0.31
Ube4aE9Q735 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.97■□□□□ 0.31
Ube4aE9Q735 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.97■□□□□ 0.31
Ube4aE9Q735 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.97■□□□□ 0.31
Ube4aE9Q735 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4aE9Q735 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4aE9Q735 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.97■□□□□ 0.31
Ube4aE9Q735 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.97■□□□□ 0.31
Ube4aE9Q735 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.97■□□□□ 0.31
Ube4aE9Q735 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.97■□□□□ 0.31
Ube4aE9Q735 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4aE9Q735 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4aE9Q735 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4aE9Q735 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4aE9Q735 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4aE9Q735 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4aE9Q735 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ube4aE9Q735 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ube4aE9Q735 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.96■□□□□ 0.31
Ube4aE9Q735 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4aE9Q735 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Ube4aE9Q735 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4aE9Q735 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4aE9Q735 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4aE9Q735 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4aE9Q735 Gm15429-201ENSMUST00000151268 798 ntBASIC16.96■□□□□ 0.31
Ube4aE9Q735 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4aE9Q735 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4aE9Q735 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ube4aE9Q735 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.96■□□□□ 0.31
Ube4aE9Q735 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.96■□□□□ 0.31
Ube4aE9Q735 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4aE9Q735 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4aE9Q735 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4aE9Q735 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4aE9Q735 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4aE9Q735 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ube4aE9Q735 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ube4aE9Q735 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ube4aE9Q735 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ube4aE9Q735 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ube4aE9Q735 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.95■□□□□ 0.3
Ube4aE9Q735 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.95■□□□□ 0.3
Ube4aE9Q735 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.95■□□□□ 0.3
Ube4aE9Q735 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.95■□□□□ 0.3
Ube4aE9Q735 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.95■□□□□ 0.3
Ube4aE9Q735 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.95■□□□□ 0.3
Ube4aE9Q735 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.95■□□□□ 0.3
Ube4aE9Q735 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4aE9Q735 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.95■□□□□ 0.3
Ube4aE9Q735 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ube4aE9Q735 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.94■□□□□ 0.3
Ube4aE9Q735 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.94■□□□□ 0.3
Ube4aE9Q735 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.94■□□□□ 0.3
Ube4aE9Q735 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.94■□□□□ 0.3
Ube4aE9Q735 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Gm29741-201ENSMUST00000192667 421 ntBASIC16.94■□□□□ 0.3
Ube4aE9Q735 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.94■□□□□ 0.3
Ube4aE9Q735 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.94■□□□□ 0.3
Ube4aE9Q735 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4aE9Q735 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms