Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Gm34767-201ENSMUST00000191813 1062 ntBASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Itm2b-204ENSMUST00000228637 783 ntBASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85cE9Q6B2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Prob1-201ENSMUST00000097619 3021 ntBASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Gm3756-201ENSMUST00000169182 1355 ntBASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Gm12566-201ENSMUST00000121479 359 ntBASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Gm14017-201ENSMUST00000121934 386 ntBASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Gm6222-202ENSMUST00000182143 629 ntBASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85cE9Q6B2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Gm12715-201ENSMUST00000121430 1128 ntBASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Gm16379-201ENSMUST00000161469 348 ntBASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Gm8762-201ENSMUST00000193486 339 ntBASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Gm45186-201ENSMUST00000206874 478 ntBASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc85cE9Q6B2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Gm11628-201ENSMUST00000117568 171 ntBASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Gm4909-201ENSMUST00000118749 794 ntBASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Gm7029-201ENSMUST00000173226 450 ntBASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC17.29■□□□□ 0.36
Ccdc85cE9Q6B2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms