Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Gm18246-201ENSMUST00000221023 728 ntBASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ccdc71lE9Q4T4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Gm9182-201ENSMUST00000217829 639 ntBASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Rps4l-201ENSMUST00000071745 943 ntBASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccdc71lE9Q4T4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc71lE9Q4T4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms