Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4lE9Q2N0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4lE9Q2N0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4lE9Q2N0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4lE9Q2N0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4lE9Q2N0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4lE9Q2N0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 AA543401-201ENSMUST00000164248 1269 ntBASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.02□□□□□ -0.49
Cpsf4lE9Q2N0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Mir6956-201ENSMUST00000183598 62 ntBASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4lE9Q2N0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Gm13223-201ENSMUST00000118609 747 ntBASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Gm17837-201ENSMUST00000186435 985 ntBASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Gm6916-202ENSMUST00000205523 195 ntBASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Gm6888-201ENSMUST00000221983 706 ntBASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cpsf4lE9Q2N0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms