Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nkx6-2D3Z4R4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx6-2D3Z4R4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx6-2D3Z4R4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nkx6-2D3Z4R4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Nkx6-2D3Z4R4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-2D3Z4R4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx6-2D3Z4R4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms