Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.7□□□□□ -0.38
Shank1D3YZU1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Gm9182-201ENSMUST00000217829 639 ntBASIC12.7□□□□□ -0.38
Shank1D3YZU1 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.7□□□□□ -0.38
Shank1D3YZU1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shank1D3YZU1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Olfr582-201ENSMUST00000098212 960 ntBASIC12.69□□□□□ -0.38
Shank1D3YZU1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.69□□□□□ -0.38
Shank1D3YZU1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Shank1D3YZU1 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Shank1D3YZU1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.68□□□□□ -0.38
Shank1D3YZU1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.68□□□□□ -0.38
Shank1D3YZU1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms