Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rfx8D3YU81 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rfx8D3YU81 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfx8D3YU81 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Rfx8D3YU81 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rfx8D3YU81 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.06■□□□□ 0
Rfx8D3YU81 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rfx8D3YU81 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rfx8D3YU81 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.06■□□□□ 0
Rfx8D3YU81 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Gm5566-201ENSMUST00000116118 459 ntBASIC15.06■□□□□ 0
Rfx8D3YU81 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.06■□□□□ 0
Rfx8D3YU81 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rfx8D3YU81 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Rfx8D3YU81 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.06■□□□□ 0
Rfx8D3YU81 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.06■□□□□ 0
Rfx8D3YU81 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Rfx8D3YU81 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rfx8D3YU81 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfx8D3YU81 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rfx8D3YU81 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.05■□□□□ 0
Rfx8D3YU81 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rfx8D3YU81 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rfx8D3YU81 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ 0
Rfx8D3YU81 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.05■□□□□ 0
Rfx8D3YU81 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.05■□□□□ 0
Rfx8D3YU81 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.05■□□□□ -0
Rfx8D3YU81 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.05■□□□□ -0
Rfx8D3YU81 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.05■□□□□ -0
Rfx8D3YU81 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rfx8D3YU81 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.05■□□□□ -0
Rfx8D3YU81 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.05■□□□□ -0
Rfx8D3YU81 Gm6415-201ENSMUST00000118488 348 ntBASIC15.05■□□□□ -0
Rfx8D3YU81 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Gm9719-201ENSMUST00000162765 543 ntBASIC15.05■□□□□ -0
Rfx8D3YU81 Gm25948-201ENSMUST00000175334 112 ntBASIC15.05■□□□□ -0
Rfx8D3YU81 AA619741-201ENSMUST00000195095 646 ntBASIC15.05■□□□□ -0
Rfx8D3YU81 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Rfx8D3YU81 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rfx8D3YU81 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.05■□□□□ -0
Rfx8D3YU81 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Rfx8D3YU81 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.05■□□□□ -0
Rfx8D3YU81 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfx8D3YU81 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rfx8D3YU81 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rfx8D3YU81 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rfx8D3YU81 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rfx8D3YU81 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.04■□□□□ -0
Rfx8D3YU81 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rfx8D3YU81 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rfx8D3YU81 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rfx8D3YU81 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rfx8D3YU81 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rfx8D3YU81 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfx8D3YU81 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx8D3YU81 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfx8D3YU81 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms