Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pnldc1B2RXZ1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pnldc1B2RXZ1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pnldc1B2RXZ1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pnldc1B2RXZ1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.29□□□□□ -0.12
Pnldc1B2RXZ1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pnldc1B2RXZ1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pnldc1B2RXZ1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pnldc1B2RXZ1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pnldc1B2RXZ1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pnldc1B2RXZ1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Gm5186-201ENSMUST00000218781 920 ntBASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pnldc1B2RXZ1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pnldc1B2RXZ1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pnldc1B2RXZ1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.27□□□□□ -0.12
Pnldc1B2RXZ1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.27□□□□□ -0.12
Pnldc1B2RXZ1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pnldc1B2RXZ1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pnldc1B2RXZ1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pnldc1B2RXZ1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pnldc1B2RXZ1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pnldc1B2RXZ1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pnldc1B2RXZ1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pnldc1B2RXZ1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pnldc1B2RXZ1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms