Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrn3B2RS91 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.32□□□□□ -0.12
Rrn3B2RS91 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.32□□□□□ -0.12
Rrn3B2RS91 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Gm27622-201ENSMUST00000183779 60 ntBASIC14.32□□□□□ -0.12
Rrn3B2RS91 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.32□□□□□ -0.12
Rrn3B2RS91 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rrn3B2RS91 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Gm10275-202ENSMUST00000168697 495 ntBASIC14.31□□□□□ -0.12
Rrn3B2RS91 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Gm10275-201ENSMUST00000092620 635 ntBASIC14.31□□□□□ -0.12
Rrn3B2RS91 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rrn3B2RS91 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Rrn3B2RS91 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.3□□□□□ -0.12
Rrn3B2RS91 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Gm28630-201ENSMUST00000187806 498 ntBASIC14.3□□□□□ -0.12
Rrn3B2RS91 AA619741-201ENSMUST00000195095 646 ntBASIC14.3□□□□□ -0.12
Rrn3B2RS91 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.3□□□□□ -0.12
Rrn3B2RS91 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms