Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Gm14140-201ENSMUST00000119999 995 ntBASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Gm12882-201ENSMUST00000121696 517 ntBASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Gm17968-201ENSMUST00000194902 784 ntBASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-1A0N8R1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Gm10819-201ENSMUST00000099988 561 ntBASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12-1A0N8R1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav12-1A0N8R1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms