Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav12d-1A0N8R0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav12d-1A0N8R0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav12d-1A0N8R0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav12d-1A0N8R0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms