Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc194A0A140LIT1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Mir3113-201ENSMUST00000175478 76 ntBASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc194A0A140LIT1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Gm18737-201ENSMUST00000173594 937 ntBASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc194A0A140LIT1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms